Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs68050011 chr6:127661887 GT/G 1.45E-5 106 0.98 16.23 15.17 KM Plot
LAML rs68101850 chr13:71370470 CTGAATGAA/C 1.89E-5 110 0 5 16.27 KM Plot
LAML rs6834716 chr4:4732604 A/G 2.1E-6 110 4.1 20.27 12.65 KM Plot
LAML rs6902233 chr6:127555963 A/G 3.29E-5 108 0.98 16.2 15.2 KM Plot
LAML rs6903878 chr6:127638600 C/G 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6904520 chr6:127629802 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6904630 chr6:127696869 A/G 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6906717 chr6:127596782 C/A 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6910763 chr6:127630925 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6913424 chr6:127707010 A/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6916990 chr6:127698759 G/A 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6919434 chr6:34498923 C/T 6.5E-5 110 16.27 8.1 0 KM Plot
LAML rs6930849 chr6:127630963 A/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6937287 chr6:127645719 T/A 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs6972494 chr7:151171416 G/A 2.43E-7 108 16.3 6.03 NA KM Plot